Boyne River may refer to:
Australia
- Boyne River (Central Queensland), river to the Coral Sea in Queensland
- Boyne River (Wide Bay–Burnett), tributary of the Burnett River in Queensland
- Boyne Creek (New South Wales), tributary of the Clyde River in New South Wales
Canada
- Boyne River (Manitoba)
Ontario
- Boyne River (Grey County)
- Boyne River (Muskoka District)
- Boyne River (Nottawasaga River tributary)
- Boyne River (Parry Sound District)
France
- Boyne River (France), a tributary of the Hérault
Ireland
- River Boyne
United States
- Boyne River (Michigan)